The Mgcv Package As a One-Stop-Shop for Fitting Non-Linear Ecological Models, Summer 2016, Ecological Society of America. Gavin Simpson, David Miller, Eric Pedersen.
Using R for High Performance Computing, Winter 2015, National Institute for Mathematical and Biological Synthesis. Drew Schmidt.
Bayesian Inference and Hierachical Modeling, Fall 2013, Florida Atlantic University. Robert Dorazio.
ipdw: Interpolation by Inverse Path Distance Weighting. https://github.com/jsta/ipdw
dbhydroR: Everglades Hydrologic and Water Quality Data from R. https://github.com/SFWMD/dbhydroR
rnoaa: ‘NOAA’ Weather Data from R. https://github.com/ropensci/rnoaa
Stachelek, J., 2016. [Re] Least-cost modelling on irregular landscape graphs. ReScience. 2(1), 1-4. pdf
Stachelek J., Madden, C.J. 2015. Application of Inverse Path Distance Weighting for high density spatial mapping of coastal water quality patterns. International Journal of Geographical Information Science. pdf
Stachelek, J., Dunton K.H. 2013. Freshwater inflow requirements for the Nueces Delta, Texas: Spartina alterniflora as an indicator of ecosystem condition. Texas Water Journal. 4(2), 62-73. pdf
Park, S.R., Stachelek, J., Dunton K.H., (submitted) Photosynthesis and drought resilience in three emergent vascular plant species common to marshes of the western Gulf of Mexico. Estuaries and Coasts.
Stachelek J., Madden, C.J., Kelly, S.P, Blaha, M. (submitted). Fine-scale relationships between phytoplankton abundance and environmental drivers in Florida Bay, USA.
Stachelek J., Kelly, S.P, Sklar, F., Coronado, C.M., Troxler, T., Bauman, L. (submitted). A mesocosm design for simulating sea-level rise associated saltwater intrusion in coastal wetlands.
Stachelek, J. (2017) Lake Connectivity Effects on Phosphorus in 1,000s of Lakes. Michigan State University Fisheries and Wildlife Graduate Research Symposium.
Stachelek, J., Madden, C.J., Kelly, S., Blaha, M. (2016). Fine-scale spatial patterning of phytoplankton abundance in a coastal estuary. Ecological Society of America Meeting, Fort Lauderdale, Florida, USA. slides
Troxler, T.G., Gaiser, E.E., Charles, S.P., Coronado, C., Davis, S., Fuentes, J., Kelly, S., Kominoski, J.S., Madden, C.J., Mazzei, V., Sklar, F.H. Sklar, Servais, S., Stachelek, J., Wilson, B.J. (2016). Carbon cycle science in the Florida Coastal Everglades: Research to inform carbon and water management. Ecological Society of America Meeting, Fort Lauderdale, Florida, USA.
Sklar, F.H., Coronado, C., Troxler, T.G., Stachelek, J., Kelly, S., Kominoski, J.S. (2016). Coastal subsidence as a function of salinity intrusion and peat decomposition in a karst environment. Ecological Society of America Meeting, Fort Lauderdale, Florida, USA.
Stachelek, J., (2015) Resolving Fine-Scale Patterning and Restoration Outcomes in the Coastal Everglades. Greater Everglades Ecosystem Restoration Meeting, Coral Springs, Florida, USA. slides
Kominoski, J., Servais, S., B.J. Wilson, V. Mazzei, E.E. Gaiser, T. Troxler, C. Coronado-Molina, S.E. Davis, S.P. Kelly, J. Stachelek, F.H. Sklar, C.J. Madden, and L. Bauman, (2015). Effects of increased water salinity and inundation on microbial processing of carbon and nutrients in oligohaline wetland soils. Ecological Society of America 100th Annual Meeting, Baltimore, Maryland, USA.
Troxler, T., F.H. Sklar, S.E. Davis, E.E. Gaiser, S.P. Kelly, J. Kominoski, C.J. Madden, V. Mazzei, C. Coronado-Molina, D.T. Rudnick, S. Servais, J. Stachelek, and B.J. Wilson, (2015) The effects of projected sea-level rise on Everglades coastal ecosystems: Evaluating the potential for and mechanisms of peat collapse. Ecological Society of America 100th Annual Meeting, Baltimore, Maryland, USA.
Wilson, B., Troxler, T., Gaiser, E., Kominoski, J., Richards, J., Servais, S., Stachelek, J., Kelly, S. Kelly, Sklar, F., Coronado-Molina, C., Madden, C., Davis, S.E., Mazzei, V., Schulte, N., Bauman, L., (2014) Ecosystem Productivity Responses to Saltwater Intrusion and P Loading As a Result of Future Sea Level Rise in the Coastal Everglades. American Geophysical Union Meeting, San Fransisco, California, USA.
Stachelek, J., Madden, C.J. (2013) High Density Spatial Mapping of Water Quality Patterns Reveals Impacts of Freshwater Inputs in Florida Bay, USA. Poster Presentation at the Coastal and Esutarine Reserach Federation, San Diego, California, USA.
Madden, C.J., McDonald, A.A., Koch-Rose, M., Glibert, P., Kelly, S.P., Stachelek, J., (2013) Exploring Linkages Among Watershed-Estuary Processes in the Southern Everglades, Florida Bay Using Model Synthesis. Oral Presentation at the Coastal and Esutarine Reserach Federation, San Diego, California, USA.
Stachelek J., Dunton, K.H. (2011). Estimation of freshwater inflow requirements for a semi-arid salt marsh using emergent plants as indicators of ecosystem condition. Oral Presentation at the Coastal and Esutarine Reserach Federation, Daytona Beach, Florida, USA.
Park, S.R., Stachelek J., Dunton, K.H. (2011). Seasonal variations in photosynthetic characteristics of three major emergent salt marsh plants in the Southwestern Gulf of Mexico. Oral Presentation at the Coastal and Esutarine Reserach Federation, Daytona Beach, Florida, USA.
Stachelek J., Dunton, K.H. (2011). Porewater salinity dynamics within emergent salt marsh vegetation. Oral Presentation at the Benthic Ecology Meeting, Mobile, Alabama, USA.
Instructor (2016 - present)
Delivered workshops (2) to teach basic lab skills for research computing
AP Human Geography / GIS (Fall 2010 / Spring 2011)
Developed GIS lesson material; delivered lessons; evaluated student work
Introduction to Oceanography (Fall 2009/Spring 2010)
Taught lectures; delivered laboratory practicals; marked assignments and exams
Soranno, P., King, K., Poisson, A., Stachelek, J., Boudreau, C., Skaff, N., Smith, N. (2017) Cyberinfrastructure support for collaboration and open science in ecology. NSF Request for Information on Future Needs for Advanced Cyberinfrastructure to Support Science and Engineering Research (https://www.nsfci2030.org/)
Reviewer (2017) Journal of Open Source Software, Frontiers in Ecology and Evolution
Reviewer (2016) Texas Water Journal, Journal of Open Source Software (2), Peerage of Science, Journal of Atmospheric and Oceanic Technology
Reviewer (2015) Ecological Modelling
Lesson Mainainter, (2015 - present), Geospatial Data Analysis with R. Data Carpentry.
NEON spatio-temporal hackathon (2015) - developed tutorials and assessment instruments to teach fundamental big data skills needed to work efficiently with large spatio-temporal data using open tools, such as R and Python. link
Everglades Day (2016) Guided tours of science activities at the Loxahatchee Impoundment Landscape Assessment. 17th Annual Everglades Day, Loxahatchee National Wildlife Refuge.
National Public Radio (2016) Rising Seas Push Too Much Salt Into the Florida Everglades. link
PBS Newshour (2015) Florida’s Everglades face new invasive threat: rising sea levels. youtube
Coastal and Estuarine Research Federation
Ecological Society of America
Foundation for Open Access Statistics